Review of Harmful Algal Blooms in the Kenyan Major Freshwater Lakes: Impacts on Local Community Livelihoods and Sustainable Mitigation Strategies
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Keywords
Résumé
Harmful algal blooms (HABs) have emerged as a major environmental and socio-economic challenge in Kenya’s freshwater ecosystems, particularly in lakes such as Victoria, Naivasha, and Baringo. These blooms, driven by nutrient enrichment, climate change, and land-use changes, threaten water quality, biodiversity, and the livelihoods of dependent communities. This review aims to synthesize existing literature on the causes, impacts, and mitigation of HABs in Kenya’s freshwater ecosystems, with a focus on their implications for community livelihoods and ecosystem sustainability. A systematic review approach was employed, drawing on peer-reviewed journal articles, government and NGO reports, and regional case studies published between 2003 and 2025. The analysis categorizes findings into four key themes: (1) Freshwater lakes affected by HABs in Kenya (2) Causes and contributing factors of HABs in the Kenyan Freshwater Lakes including nutrient enrichment and climate change; (3) ecological and socio-economic impacts, particularly on fisheries, aquaculture, and public health; and (4) mitigation and, management strategies, highlighting both policy frameworks and community-based interventions. The findings reveal that while Kenya has made strides in freshwater management, challenges persist due to inadequate monitoring, weak enforcement of water quality regulations, and limited community awareness. Sustainable solutions are critical for long-term management. Eco-friendly agricultural practices, constructed wetlands for wastewater treatment, and community-based monitoring programs offer promising approaches. Combining scientific research with traditional knowledge could enhance resilience and adaptive strategies. The review recommends improved policy coordination, investment in green technologies such as bioremediation, and enhanced public education to reduce nutrient loading. Overall, this paper underscores the urgent need for a multidisciplinary approach to address HABs in Kenya’s freshwater ecosystems. By linking ecological health to community well-being, the review contributes to the broader discourse on sustainable freshwater resource management in sub-Saharan Africa.
Références
Anderson, D. M., Cembella, A. D., & Hallegraeff, G. M. (2012). Progress in understanding harmful algal blooms: paradigm shifts and new technologies for research, monitoring, and management. Annual review of marine science, 4, 143-176. https://doi.org/10.1146/annurev-marine-120308-081121
Anderson, D. M., Fensin, E., Gobler, C. J., Hoeglund, A. E., Hubbard, K. A., Kulis, D. M., ... & Trainer, V. L. (2021). Marine harmful algal blooms (HABs) in the United States: History, current status and future trends. Harmful algae, 102, 101975. https://doi.org/10.1016/j.hal.2021.101975
Chorus, I., & Welker, M. (2021). Toxic cyanobacteria in water: a guide to their public health consequences, monitoring and management (p. 858). Taylor & Francis. https://library.oapen.org/handle/20.500.12657/47047
Codd, G. A., Morrison, L. F., & Metcalf, J. S. (2005). Cyanobacterial toxins: risk management for health protection. Toxicology and applied pharmacology, 203(3), 264-272. https://doi.org/10.1016/j.taap.2004.02.016
Elidrissi El Yallouli, N., Lahrouni, M., Mugani, R., Oudra, B., & Poté, J. (2024). Insight in limited research on environmental factors and health implications of toxic cyanobacteria bloom in African freshwater bodies. Discover Public Health, 21(1), 202. https://doi.org/10.1186/s12982-024-00302-x
Feng, L., Wang, Y., Hou, X., Qin, B., Kutser, T., Qu, F., ... & Zheng, C. (2024). Harmful algal blooms in inland waters. Nature Reviews Earth & Environment, 5(9), 631-644. https://doi.org/10.1038/s43017-024-00578-2
Fiorella, K. J., Milner, E. M., Salmen, C. R., Hickey, M. D., Omollo, D. O., Odhiambo, A., ... & Brashares, J. S. (2017). Human health alters the sustainability of fishing practices in East Africa. Proceedings of the National Academy of Sciences, 114(16), 4171-4176. https://doi.org/10.1073/pnas.1613260114
Gobler, C. J., Doherty, O. M., Hattenrath-Lehmann, T. K., Griffith, A. W., Kang, Y., & Litaker, R. W. (2017). Ocean warming since 1982 has expanded the niche of toxic algal blooms in the North Atlantic and North Pacific oceans. Proceedings of the National Academy of Sciences, 114(19), 4975-4980. https://doi.org/10.1073/pnas.1619575114
Gobler, C. J., Drinkwater, R. W., Anthony, A., Goleski, J. A., Famularo-Pecora, A. M. E., Wallace, M. K., ... & Hem, R. (2024). Sewage-and fertilizer-derived nutrients alter the intensity, diversity, and toxicity of harmful cyanobacterial blooms in eutrophic lakes. Frontiers in Microbiology, 15, 1464686. https://doi.org/10.3389/fmicb.2024.1464686
Harper, D. M., Morrison, E. H., Macharia, M. M., Mavuti, K. M., & Upton, C. (2011). Lake Naivasha, Kenya: ecology, society and future. Freshwater Reviews, 4(2), 89-114. https://doi.org/10.1608/FRJ-4.2.149
Hart, L. N., Zepernick, B. N., Natwora, K. E., Brown, K. M., Obuya, J. A., Lomeo, D., ... & Dick, G. J. (2025). Metagenomics reveals spatial variation in cyanobacterial composition, function, and biosynthetic potential in the Winam Gulf, Lake Victoria, Kenya. Applied and Environmental Microbiology, 91(2), e01507-24. https://doi.org/10.1128/aem.01507-24
Huisman, J., Sharples, J., Stroom, J. M., Visser, P. M., Kardinaal, W. E. A., Verspagen, J. M., & Sommeijer, B. (2004). Changes in turbulent mixing shift competition for light between phytoplankton species. Ecology, 85(11), 2960-2970. https://doi.org/10.1890/03-0763
Igwaran, A., Kayode, A. J., Moloantoa, K. M., Khetsha, Z. P., & Unuofin, J. O. (2024). Cyanobacteria harmful algae blooms: causes, impacts, and risk management. Water, Air, & Soil Pollution, 235(1), 71. https://doi.org/10.1007/s11270-023-06782-y
Jimoh, E., Vogler, C., & Waters, J. (2007). Perceived and real sources of pollution in Lake Naivasha. Tropical Biology Association, Nairobi. Kenya. https://tropical-biology.org/wp-content/uploads/2021/03/Jimoh-Vogler-Waters_2007.pdf
Kimambo, O. N., Gumbo, J. R., & Chikoore, H. (2019). The occurrence of cyanobacteria blooms in freshwater ecosystems and their link with hydro-meteorological and environmental variations in Tanzania. Heliyon, 5(3). https://www.cell.com/heliyon/fulltext/S2405-8440(18)37509-1
Lan, J., Liu, P., Hu, X., & Zhu, S. (2024). Harmful algal blooms in eutrophic marine environments: causes, monitoring, and treatment. Water, 16(17), 2525. https://doi.org/10.3390/w16172525
Madzivanzira, T. C., Mungenge, C. P., Dube, T., & Dalu, T. (2023). From benthic to floating: phytoplankton dynamics in African freshwater lakes and reservoirs. In Lakes of Africa (pp. 97-137). Elsevier. https://doi.org/10.1016/B978-0-323-95527-0.00012-9
Mbonde, A. S., Sitoki, L., & Kurmayer, R. (2015). Phytoplankton composition and microcystin concentrations in open and closed bays of Lake Victoria, Tanzania. Aquatic ecosystem health & management, 18(2), 212-220. https://pubmed.ncbi.nlm.nih.gov/28077928/
Mchau, G. J., Makule, E., Machunda, R., Gong, Y. Y., & Kimanya, M. (2019). Harmful algal bloom and associated health risks among users of Lake Victoria freshwater: Ukerewe Island, Tanzania. Journal of water and health, 17(5), 826-836. https://doi.org/10.2166/wh.2019.083
Mitra, A., & Flynn, K. J. (2006). Promotion of harmful algal blooms by zooplankton predatory activity. Biology letters, 2(2), 194-197. https://doi.org/10.1098/rsbl.2006.0447
Moore, S. K., Trainer, V. L., Mantua, N. J., Parker, M. S., Laws, E. A., Backer, L. C., & Fleming, L. E. (2008). Impacts of climate variability and future climate change on harmful algal blooms and human health. Environmental health, 7(Suppl 2), S4. https://doi.org/10.1186/1476-069X-7-S2-S4
Musa, S., Aura, C. M., Tomasson, T., Sigurgeirsson, Ó., & Thorarensen, H. (2022). Impacts of Nile tilapia cage culture on water and bottom sediment quality: the ability of an eutrophic lake to absorb and dilute perturbations. Lakes & Reservoirs: Research & Management, 27(4), e12413. https://doi.org/10.1111/lre.12413
Mutebi, A., Njuguna, H., & Wambua, S. (2022). Climate Variability and Its Effects on Freshwater Ecosystems in Kenya. Environmental Management Journal, 14(1), 45-62.
National Oceanic and Atmospheric Administration. (2025). Harmful Algal Bloom (Red Tide). Retrieved from https://www.noaa.gov/introduction-to-harmful-algal-blooms
Natural Resources Defense Council. (2019). Freshwater harmful algal blooms, 101. Retrieved from https://www.nrdc.org/stories/freshwater-harmful-algal-blooms-101
Ndlela, L. L., Oberholster, P. J., Van Wyk, J. H., & Cheng, P. H. (2016). An overview of cyanobacterial bloom occurrences and research in Africa over the last decade. Harmful Algae, 60, 11-26. https://doi.org/10.1016/j.hal.2016.10.001
Newton, A. R., & Melaram, R. (2023). Harmful algal blooms in agricultural irrigation: risks, benefits, and management. Frontiers in Water, 5, 1325300. https://doi.org/10.3389/frwa.2023.1325300
Njiru, M., Van der Knaap, M., Taabu-Munyaho, A., Nyamweya, C. S., Kayanda, R. J., & Marshall, B. E. (2014). Management of Lake Victoria fishery: are we looking for easy solutions?. Aquatic Ecosystem Health & Management, 17(1), 70-79. https://doi.org/10.1080/14634988.2014.881220
Nwankwegu, A. S., Li, Y., Huang, Y., Wei, J., Norgbey, E., Sarpong, L., ... & Wang, K. (2019). Harmful algal blooms under changing climate and constantly increasing anthropogenic actions: the review of management implications. 3 Biotech, 9(12), 449. https://doi.org/10.1007/s13205-019-1976-1
Nyamweya, C., Lawrence, T. J., Ajode, M. Z., Smith, S., Achieng, A. O., Barasa, J. E., ... & Nkalubo, W. (2023). Lake Victoria: Overview of research needs and the way forward. Journal of Great Lakes Research, 49(6), 102211. https://doi.org/10.1016/j.jglr.2023.06.009
O’Neil, J. M., Davis, T. W., Burford, M. A., & Gobler, C. J. (2012). The rise of harmful cyanobacteria blooms: the potential roles of eutrophication and climate change. Harmful algae, 14, 313-334. https://doi.org/10.1016/j.hal.2011.10.027
Obuya, J. A., Onyango, H. O., Olokotum, M., Zepernick, B., Natwora, K., Otieno, D., ... & Keyombe, J. L. (2024). Socioeconomic consequences of cyanobacterial harmful algal blooms in small-scale fishing communities of Winam Gulf, Lake Victoria. Journal of Great Lakes Research, 50(5), 102236. https://doi.org/10.1016/j.jglr.2023.09.007
Ochuka, M., Ikporukpo, C., Mijinyawa, Y., & Ogendi, G. (2019). Land use/land cover dynamics and anthropogenic driving factors in lake baringo catchment, Rift Valley, Kenya. Natural Resources, 10(10), 367.
Odada, E. O., Olago, D. O., Kulindwa, K., Ntiba, M., & Wandiga, S. (2004). Mitigation of environmental problems in Lake Victoria, East Africa: causal chain and policy options analyses. Ambio: A journal of the human environment, 33(1), 13-23. https://doi.org/10.1579/0044-7447-33.1.13
Oh, J. W., Pushparaj, S. S. C., Muthu, M., & Gopal, J. (2023). Review of harmful algal blooms (HABs) causing marine fish kills: toxicity and mitigation. Plants, 12(23), 3936. https://doi.org/10.3390/plants12233936
Okello, W., & Kurmayer, R. (2011). Seasonal development of cyanobacteria and microcystin production in Ugandan freshwater lakes. Lakes & Reservoirs: Research & Management, 16(2), 123-135. https://doi.org/10.1111/j.1440-1770.2011.00450.x
Okello, W., Portmann, C., Erhard, M., Gademann, K., & Kurmayer, R. (2010). Occurrence of microcystin‐producing cyanobacteria in Ugandan freshwater habitats. Environmental toxicology, 25(4), 367-380. https://doi.org/10.1002/tox.20522
Olokotum, M., Humbert, J. F., Quiblier, C., Okello, W., Semyalo, R., Troussellier, M., ... & Bernard, C. (2022). Characterization of potential threats from cyanobacterial toxins in Lake Victoria embayments and during water treatment. Toxins, 14(10), 664. https://doi.org/10.3390/ toxins14100664. https://doi.org/10.3390/toxins14100664
Olokotum, M., Mitroi, V., Troussellier, M., Semyalo, R., Bernard, C., Montuelle, B., ... & Humbert, J. F. (2020). A review of the socioecological causes and consequences of cyanobacterial blooms in Lake Victoria. Harmful algae, 96, 101829. https://doi.org/10.1016/j.hal.2020.101829
Omara, T., Nagawa, C. B., Kyarimpa, C., Böhmdorfer, S., Rosenau, T., Lugasi, S. O., ... & Ssebugere, P. (2023). Lacustrine cyanobacteria, algal blooms and cyanotoxins in East Africa: implications for human and ecological health protection. Phycology, 3(1), 147-167. https://doi.org/10.3390/phycology3010010
Onyango, J., Kitaka, N., Van Bruggen, J. J. A., Irvine, K., & Simaika, J. (2024). Agricultural intensification in Lake Naivasha Catchment in Kenya and associated nutrients and pesticides pollution. Scientific Reports, 14(1), 18539. https://doi.org/10.1038/s41598-024-67460-5
Paerl, H. W., & Huisman, J. (2008). Blooms like it hot. Science, 320(5872), 57-58. https://doi.org/10.1126/science.1155398
Paerl, H. W., & Huisman, J. (2009). Climate change: a catalyst for global expansion of harmful cyanobacterial blooms. Environmental microbiology reports, 1(1), 27-37. https://doi.org/10.1111/j.1758-2229.2008.00004.x
Paerl, H. W., & Otten, T. G. (2016). Duelling ‘CyanoHABs’: unravelling the environmental drivers controlling dominance and succession among diazotrophic and non‐N2‐fixing harmful cyanobacteria. Environmental microbiology, 18(2), 316-324. https://doi.org/10.1111/1462-2920.13035
Paerl, H. W., Hall, N. S., & Calandrino, E. S. (2011). Controlling harmful cyanobacterial blooms in a world experiencing anthropogenic and climatic-induced change. Science of the total environment, 409(10), 1739-1745. https://doi.org/10.1016/j.scitotenv.2011.02.001
Paerl, H. W., Otten, T. G., & Kudela, R. (2018). Mitigating the Expansion of Harmful Algal Blooms Across the Freshwater-to-Marine Continuum. Environmental science & technology, 52(10), 5519-5529. https://pubs.acs.org/doi/full/10.1021/acs.est.7b05950
Pawlik-Skowrońska, B., Toporowska, M., & Mazur-Marzec, H. (2022). Cyanobacterial blooms and cyanotoxins in African freshwaters. Water Research, 217, 118401.
Roegner, A. F., Corman, J. R., Sitoki, L. M., Kwena, Z. A., Ogari, Z., Miruka, J. B., ... & Miller, T. R. (2023). Impacts of algal blooms and microcystins in fish on small-scale fishers in Winam Gulf, Lake Victoria: implications for health and livelihood. Ecology and society: a journal of integrative science for resilience and sustainability, 28(1), 49. https://doi.org/10.5751/es-13860-280149
Roegner, A., Sitoki, L., Weirich, C., Corman, J., Owage, D., Umami, M., ... & Miller, T. R. (2020). Harmful algal blooms threaten the health of peri-urban fisher communities: A case study in Kisumu Bay, Lake Victoria, Kenya. Exposure and Health, 12(4), 835-848. https://doi.org/10.1007/s12403-019-00342-8
Rolton, A., Rhodes, L., Hutson, K. S., Biessy, L., Bui, T., MacKenzie, L., ... & Smith, K. F. (2022). Effects of harmful algal blooms on fish and shellfish species: A case study of New Zealand in a changing environment. Toxins, 14(5), 341. https://doi.org/10.3390/toxins14050341
Sahoo, D., Busari, I., Nix, H., & White, S. A. (2024). Impacts of Harmful Algal Blooms (HABs) on Agriculture: A Short Communication. Journal of South Carolina Water Resources, 9(2), 9. https://open.clemson.edu/jscwr/vol9/iss2/9/
Schindler, D. W., Hecky, R. E., Findlay, D. L., Stainton, M. P., Parker, B. R., Paterson, M. J., ... & Kasian, S. (2008). Eutrophication of lakes cannot be controlled by reducing nitrogen input: results of a 37-year whole-ecosystem experiment. Proceedings of the National Academy of Sciences, 105(32), 11254-11258. https://doi.org/10.1073/pnas.0805108105
Sitoki, L., Kofler, W., & Rott, E. (2013). Planktonic needle-shaped Nitzschia species from Lake Victoria, Africa, revisited. Diatom research, 28(2), 165-174. https://doi.org/10.1080/0269249X.2013.765509
Sitoki, L., Kurmayer, R., & Rott, E. (2012). Spatial variation of phytoplankton composition, biovolume, and resulting microcystin concentrations in the Nyanza Gulf (Lake Victoria, Kenya). Hydrobiologia, 691(1), 109-122. https://doi.org/10.1007/s10750-012-1062-8
Stoyneva-Gärtner, M. P., Morana, C., Borges, A. V., Okello, W., Bouillon, S., Deirmendjian, L., ... & Descy, J. P. (2020). Diversity and ecology of phytoplankton in Lake Edward (East Africa): Present status and long-term changes. Journal of Great Lakes Research, 46(4), 741-751. https://doi.org/10.1016/j.jglr.2020.01.003
U.S. Environmental Protection Agency. (2025). Climate Change and Freshwater Harmful Algal Blooms. Retrieved from
https://www.epa.gov/habs/climate-change-and-freshwater-harmful-algal-blooms
Winder, M., & Sommer, U. (2012). Phytoplankton response to a changing climate. Hydrobiologia, 698(1), 5-16. https://doi.org/10.1007/s10750-012-1149-2
Woolway, R. I., Jennings, E., Shatwell, T., Golub, M., Pierson, D. C., & Maberly, S. C. (2021). Climate Change Effects on Thermal and Oxygen Dynamics of Deep Lakes. Limnology and Oceanography Letters, 6(2), 1-18.
Zepernick, B.N., Hart, L.N., Chase, E.E., Natwora, K.E., Obuya, J.A., Olokotum, M., Houghton, K.A., Kiledal, E.A., Achieng, D., Barker, K.B. & Basweti, G.M. (2024). Molecular investigation of harmful cyanobacteria reveals hidden risks and niche partitioning in Kenyan Lakes. Harmful algae, 140, 102757. https://doi.org/10.1016/j.hal.2024.102757